Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | CC99x_005835 | Not Available | Negative | 1365733 - 1366461 | 28598.9 |
| glutamate--cysteine ligase | CC99x_005840 | Not Available | Negative | 1366428 - 1367666 | 47223.8 |
| rimk family protein | CC99x_005845 | Not Available | Negative | 1367653 - 1369107 | 56040.3 |
| peptidase-c39 like family protein | CC99x_005850 | Not Available | Negative | 1369117 - 1369836 | 27055.2 |
| hypothetical protein | CC99x_005855 | Not Available | Positive | 1369946 - 1370092 | 5493.17 |
| class i sam-dependent methyltransferase | CC99x_005860 | Not Available | Positive | 1370180 - 1371148 | 36443.4 |
| dicarboxylate/amino acid:cation symporter | CC99x_005865 | Not Available | Negative | 1371198 - 1372418 | 45198.7 |
| hypothetical protein | CC99x_005870 | Not Available | Positive | 1372780 - 1373805 | 39306.4 |
| endonuclease | CC99x_005875 | Not Available | Positive | 1374227 - 1374946 | 28130.0 |
| mechanosensitive ion channel | CC99x_005880 | Not Available | Negative | 1374958 - 1377273 | 88820.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.