Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase sixa | CC99x_005785 | Not Available | Positive | 1355241 - 1355720 | 18158.8 |
| peptide deformylase | CC99x_005790 | Not Available | Negative | 1355717 - 1356253 | 20456.7 |
| putative glycoside hydrolase | CC99x_005795 | Not Available | Negative | 1356274 - 1357212 | 36273.4 |
| hypothetical protein | CC99x_005800 | Not Available | Positive | 1357360 - 1358025 | 25461.1 |
| hypothetical protein | CC99x_005805 | Not Available | Positive | 1358223 - 1360664 | 93734.9 |
| class i sam-dependent methyltransferase | CC99x_005810 | Not Available | Positive | 1360713 - 1361552 | 31657.6 |
| hypothetical protein | CC99x_005815 | Not Available | Positive | 1361650 - 1362666 | 39357.6 |
| metal-dependent hydrolase | CC99x_005820 | Not Available | Negative | 1362875 - 1363702 | 32665.0 |
| rhomboid family intramembrane serine protease | CC99x_005825 | Not Available | Negative | 1363699 - 1364283 | 21856.2 |
| hypothetical protein | CC99x_005830 | Not Available | Negative | 1364305 - 1365705 | 52409.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.