Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_005735 | Not Available | Positive | 1346212 - 1346451 | 8995.69 |
| dmt family transporter | CC99x_005740 | Not Available | Negative | 1346507 - 1346956 | 16039.3 |
| hypothetical protein | CC99x_005745 | Not Available | Negative | 1346969 - 1347631 | 24554.4 |
| hypothetical protein | CC99x_005750 | Not Available | Positive | 1347872 - 1348213 | 12956.4 |
| rid family detoxifying hydrolase | CC99x_005755 | Not Available | Positive | 1348246 - 1348626 | 13511.5 |
| mfs transporter | CC99x_005760 | Not Available | Positive | 1348873 - 1350255 | 52110.1 |
| hypothetical protein | CC99x_005765 | Not Available | Positive | 1350297 - 1351334 | 36907.9 |
| hypothetical protein | CC99x_005770 | Not Available | Positive | 1351598 - 1352533 | 32744.8 |
| hypothetical protein | CC99x_005775 | Not Available | Positive | 1352752 - 1353816 | 37730.9 |
| tyrosine-type recombinase/integrase | CC99x_005780 | Not Available | Negative | 1353926 - 1355128 | 46268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.