Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_005685 | Not Available | Positive | 1334624 - 1336138 | 56911.7 |
| hypothetical protein | CC99x_005690 | Not Available | Negative | 1336198 - 1336791 | 22142.5 |
| histidine phosphatase family protein | CC99x_005695 | Not Available | Positive | 1336970 - 1337668 | 26309.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CC99x_005700 | Not Available | Negative | 1337746 - 1339797 | 76820.9 |
| hypothetical protein | CC99x_005705 | Not Available | Positive | 1340004 - 1341119 | 42154.2 |
| serine/threonine-protein phosphatase | CC99x_005710 | Not Available | Positive | 1341183 - 1341923 | 27098.6 |
| hypothetical protein | CC99x_005715 | Not Available | Positive | 1342120 - 1343742 | 59523.7 |
| hypothetical protein | CC99x_005720 | Not Available | Negative | 1343802 - 1344044 | 8957.37 |
| hu family dna-binding protein | CC99x_005725 | Not Available | Positive | 1344670 - 1345185 | 18280.6 |
| pyridoxamine 5'-phosphate oxidase | CC99x_005730 | Not Available | Positive | 1345358 - 1346008 | 25229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.