Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CC99x_005635 | Not Available | Positive | 1323469 - 1324194 | 27329.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CC99x_005640 | Not Available | Positive | 1324188 - 1324697 | 18584.6 |
| 5'/3'-nucleotidase sure | CC99x_005645 | Not Available | Positive | 1324694 - 1325476 | 27866.3 |
| deda family protein | CC99x_005650 | Not Available | Positive | 1325558 - 1326145 | 22013.4 |
| peptidoglycan dd-metalloendopeptidase family protein | CC99x_005655 | Not Available | Positive | 1326129 - 1326989 | 31355.6 |
| hypothetical protein | CC99x_005660 | Not Available | Negative | 1327017 - 1328135 | 41978.0 |
| sigma-70 family rna polymerase sigma factor | CC99x_005665 | Not Available | Positive | 1328734 - 1329579 | 32706.6 |
| paai family thioesterase | CC99x_005670 | Not Available | Positive | 1329913 - 1330383 | 17249.6 |
| duf2608 domain-containing protein | CC99x_005675 | Not Available | Positive | 1330725 - 1331975 | 48119.9 |
| trypsin-like peptidase domain-containing protein | CC99x_005680 | Not Available | Negative | 1332625 - 1334319 | 63024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.