Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_005585 | Not Available | Positive | 1312743 - 1313363 | 23972.1 |
| dna-binding domain-containing protein | CC99x_005590 | Not Available | Negative | 1313672 - 1314454 | 30405.1 |
| duf692 domain-containing protein | CC99x_005595 | Not Available | Negative | 1314458 - 1315462 | 38153.9 |
| hypothetical protein | CC99x_005600 | Not Available | Negative | 1315568 - 1315825 | 8718.4 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CC99x_005605 | Not Available | Positive | 1316077 - 1317030 | 35515.1 |
| trna lysidine(34) synthetase tils | CC99x_005610 | Not Available | Positive | 1317333 - 1318715 | 51965.0 |
| ctp synthase | CC99x_005615 | Not Available | Positive | 1318968 - 1320602 | 60200.4 |
| 3-deoxy-8-phosphooctulonate synthase | CC99x_005620 | Not Available | Positive | 1320726 - 1321559 | 30171.6 |
| phosphopyruvate hydratase | CC99x_005625 | Not Available | Positive | 1321578 - 1322867 | 46740.9 |
| septum formation initiator family protein | CC99x_005630 | Not Available | Positive | 1322889 - 1323158 | 10110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.