Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | CC99x_005535 | Not Available | Positive | 1300065 - 1302413 | 87258.6 |
| omph family outer membrane protein | CC99x_005540 | Not Available | Positive | 1302445 - 1302957 | 19496.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CC99x_005545 | Not Available | Positive | 1302984 - 1304078 | 39102.9 |
| 3-hydroxyacyl-acp dehydratase fabz | CC99x_005550 | Not Available | Positive | 1304109 - 1304543 | 15910.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | CC99x_005555 | Not Available | Positive | 1304540 - 1305310 | 27378.7 |
| lipid-a-disaccharide synthase | CC99x_005560 | Not Available | Positive | 1305328 - 1306488 | 43432.9 |
| ribonuclease hii | CC99x_005565 | Not Available | Positive | 1306768 - 1307343 | 20872.7 |
| dna polymerase iii subunit alpha | CC99x_005570 | Not Available | Positive | 1307330 - 1310806 | 130941.0 |
| hypothetical protein | CC99x_005575 | Not Available | Positive | 1311277 - 1311807 | 20135.2 |
| hypothetical protein | CC99x_005580 | Not Available | Positive | 1311978 - 1312610 | 23503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.