Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | CC99x_005485 | Not Available | Negative | 1288572 - 1289342 | 28320.4 |
| 30s ribosomal protein s2 | CC99x_005490 | Not Available | Positive | 1289557 - 1290297 | 27533.4 |
| translation elongation factor ts | CC99x_005495 | Not Available | Positive | 1290371 - 1291258 | 32277.0 |
| ump kinase | CC99x_005500 | Not Available | Positive | 1291255 - 1291980 | 26208.8 |
| ribosome recycling factor | CC99x_005505 | Not Available | Positive | 1291977 - 1292534 | 21067.7 |
| di-trans,poly-cis-decaprenylcistransferase | CC99x_005510 | Not Available | Positive | 1292877 - 1293575 | 27036.3 |
| phosphatidate cytidylyltransferase | CC99x_005515 | Not Available | Positive | 1293554 - 1294393 | 30680.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CC99x_005520 | Not Available | Positive | 1294390 - 1295574 | 42661.1 |
| sigma e protease regulator rsep | CC99x_005525 | Not Available | Positive | 1295835 - 1297196 | 50240.9 |
| hypothetical protein | CC99x_005530 | Not Available | Positive | 1297658 - 1299754 | 75555.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.