Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_005435 | Not Available | Negative | 1276391 - 1276675 | 10324.3 |
| hypothetical protein | CC99x_005440 | Not Available | Negative | 1276681 - 1276968 | 10238.2 |
| hypothetical protein | CC99x_005445 | Not Available | Positive | 1277410 - 1277820 | 16052.1 |
| hypothetical protein | CC99x_005450 | Not Available | Positive | 1277839 - 1278714 | 32611.5 |
| hypothetical protein | CC99x_005455 | Not Available | Negative | 1278733 - 1279353 | 23087.2 |
| hypothetical protein | CC99x_005460 | Not Available | Positive | 1279609 - 1283031 | 128312.0 |
| transposase | CC99x_005465 | Not Available | Positive | 1283138 - 1284106 | 36387.4 |
| hypothetical protein | CC99x_005470 | Not Available | Negative | 1284114 - 1284377 | 10061.2 |
| hypothetical protein | CC99x_005475 | Not Available | Negative | 1284379 - 1285431 | 39589.4 |
| [protein-pii] uridylyltransferase | CC99x_005480 | Not Available | Negative | 1285891 - 1288575 | 103695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.