Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dota/tray family protein | CC99x_005385 | Not Available | Negative | 1264796 - 1267000 | 77143.9 |
| dota/tray family protein | CC99x_005390 | Not Available | Negative | 1267017 - 1269155 | 75883.7 |
| type ivb secretion system protein icmv | CC99x_005395 | Not Available | Negative | 1269156 - 1269659 | 19392.6 |
| type ivb secretion system protein icmw | CC99x_005400 | Not Available | Positive | 1270263 - 1270718 | 17515.1 |
| hypothetical protein | CC99x_005405 | Not Available | Positive | 1270711 - 1271046 | 11226.0 |
| hypothetical protein | CC99x_005410 | Not Available | Positive | 1271110 - 1272279 | 43716.0 |
| bcct family transporter | CC99x_005415 | Not Available | Positive | 1272396 - 1273907 | 56838.5 |
| hypothetical protein | CC99x_005420 | Not Available | Positive | 1274069 - 1274911 | 31539.7 |
| hypothetical protein | CC99x_005425 | Not Available | Positive | 1275067 - 1275933 | 32451.5 |
| hypothetical protein | CC99x_005430 | Not Available | Positive | 1275987 - 1276247 | 9415.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.