Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | CC99x_000420 | Not Available | Positive | 99508 - 101577 | 75575.9 |
| redoxin domain-containing protein | CC99x_000425 | Not Available | Positive | 101617 - 102252 | 22756.2 |
| hypothetical protein | CC99x_000430 | Not Available | Negative | 102311 - 103294 | 37774.8 |
| hypothetical protein | CC99x_000435 | Not Available | Positive | 103662 - 105482 | 68322.3 |
| aaa family atpase | CC99x_000440 | Not Available | Negative | 105515 - 108580 | 114312.0 |
| hypothetical protein | CC99x_000445 | Not Available | Positive | 108887 - 110008 | 43275.6 |
| hypothetical protein | CC99x_000450 | Not Available | Positive | 110043 - 110273 | 8091.83 |
| caspase family protein | CC99x_000455 | Not Available | Positive | 110661 - 111575 | 34003.0 |
| spore coat u domain-containing protein | CC99x_000460 | Not Available | Negative | 111643 - 112137 | 17308.8 |
| fimbria/pilus outer membrane usher protein | CC99x_000465 | Not Available | Negative | 112124 - 114433 | 87291.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.