Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dot/icm type iv secretion system atpase dotb | CC99x_005335 | Not Available | Negative | 1245569 - 1246714 | 42325.9 |
| type iv secretion system dotc family protein | CC99x_005340 | Not Available | Negative | 1246723 - 1247550 | 31507.8 |
| type ivb secretion system lipoprotein dotd | CC99x_005345 | Not Available | Negative | 1248184 - 1248645 | 16775.9 |
| type iv secretion protein icms | CC99x_005350 | Not Available | Positive | 1249148 - 1249492 | 12681.4 |
| type ivb secretion system coupling complex protein dotm/icmp | CC99x_005355 | Not Available | Positive | 1249512 - 1250681 | 43663.9 |
| tram recognition domain-containing protein | CC99x_005360 | Not Available | Positive | 1250711 - 1253071 | 87412.7 |
| hypothetical protein | CC99x_005365 | Not Available | Positive | 1253215 - 1262880 | 346717.0 |
| hypothetical protein | CC99x_005370 | Not Available | Positive | 1262967 - 1263683 | 26750.7 |
| hypothetical protein | CC99x_005375 | Not Available | Negative | 1263699 - 1263938 | 9185.99 |
| hypothetical protein | CC99x_005380 | Not Available | Positive | 1264005 - 1264715 | 26420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.