Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | CC99x_005285 | Not Available | Negative | 1234583 - 1234879 | 10915.8 |
| type iv secretion protein icmb | CC99x_005290 | Not Available | Negative | 1235457 - 1238468 | 111978.0 |
| type iv secretion protein icmd | CC99x_005295 | Not Available | Negative | 1238784 - 1239188 | 14067.4 |
| type ivb secretion system protein icmjdotn | CC99x_005300 | Not Available | Negative | 1239226 - 1239894 | 25580.8 |
| hypothetical protein | CC99x_005305 | Not Available | Negative | 1239896 - 1240447 | 20029.8 |
| hypothetical protein | CC99x_005310 | Not Available | Negative | 1240560 - 1241516 | 33882.5 |
| hypothetical protein | CC99x_005315 | Not Available | Negative | 1241521 - 1242957 | 51738.4 |
| doth/icmk family type iv secretion protein | CC99x_005320 | Not Available | Negative | 1242961 - 1244208 | 45084.0 |
| type ivb secretion system apparatus protein icml/doti | CC99x_005325 | Not Available | Negative | 1244306 - 1244944 | 23772.2 |
| icmt/trak family protein | CC99x_005330 | Not Available | Negative | 1245193 - 1245462 | 10637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.