Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | CC99x_005185 | Not Available | Negative | 1210067 - 1211428 | 49638.0 |
| m56 family metallopeptidase | CC99x_005190 | Not Available | Positive | 1211601 - 1212932 | 49823.4 |
| 3'-5' exonuclease | CC99x_005195 | Not Available | Positive | 1212983 - 1213762 | 30336.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CC99x_005200 | Not Available | Positive | 1213775 - 1215100 | 49449.9 |
| gtp diphosphokinase | CC99x_005205 | Not Available | Positive | 1215338 - 1217530 | 82759.7 |
| tigr00730 family rossman fold protein | CC99x_005210 | Not Available | Negative | 1218115 - 1218831 | 26832.3 |
| phosphoenolpyruvate carboxylase | CC99x_005215 | Not Available | Positive | 1218968 - 1221649 | 101585.0 |
| hdod domain-containing protein | CC99x_005220 | Not Available | Positive | 1221733 - 1223142 | 53307.4 |
| adenylate kinase | CC99x_005225 | Not Available | Positive | 1223304 - 1223957 | 24574.4 |
| thioredoxin | CC99x_005230 | Not Available | Positive | 1223987 - 1224349 | 13268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.