Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | CC99x_005135 | Not Available | Positive | 1197705 - 1198445 | 27638.3 |
| holo-acp synthase | CC99x_005140 | Not Available | Positive | 1198439 - 1198846 | 14666.7 |
| hypothetical protein | CC99x_005145 | Not Available | Positive | 1198915 - 1200702 | 68411.4 |
| two-component sensor histidine kinase bara | CC99x_005150 | Not Available | Negative | 1200994 - 1203828 | 105821.0 |
| hypothetical protein | CC99x_005155 | Not Available | Negative | 1203821 - 1204699 | 32984.7 |
| hypothetical protein | CC99x_005160 | Not Available | Positive | 1205098 - 1205373 | 10274.2 |
| kynureninase | CC99x_005165 | Not Available | Positive | 1205533 - 1206771 | 46474.1 |
| hypothetical protein | CC99x_005170 | Not Available | Positive | 1206776 - 1207711 | 36844.4 |
| hypothetical protein | CC99x_005175 | Not Available | Positive | 1207960 - 1209324 | 51283.2 |
| hypothetical protein | CC99x_005180 | Not Available | Negative | 1209456 - 1210049 | 21589.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.