Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | CC99x_005085 | Not Available | Positive | 1184562 - 1185146 | 22724.6 |
| hypothetical protein | CC99x_005090 | Not Available | Positive | 1185152 - 1185484 | 12537.8 |
| do family serine endopeptidase | CC99x_005095 | Not Available | Positive | 1185691 - 1187139 | 52901.2 |
| protein kinase | CC99x_005100 | Not Available | Positive | 1187170 - 1191822 | 176154.0 |
| translation elongation factor 4 | CC99x_005105 | Not Available | Positive | 1192186 - 1193982 | 66595.7 |
| signal peptidase i | CC99x_005110 | Not Available | Positive | 1194073 - 1194858 | 29767.4 |
| duf4845 domain-containing protein | CC99x_005115 | Not Available | Positive | 1194926 - 1195285 | 13681.0 |
| ribonuclease iii | CC99x_005120 | Not Available | Positive | 1195288 - 1195959 | 25385.5 |
| gtpase era | CC99x_005125 | Not Available | Positive | 1196052 - 1196957 | 34422.3 |
| dna repair protein reco | CC99x_005130 | Not Available | Positive | 1196987 - 1197715 | 27585.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.