Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | CC99x_005035 | Not Available | Positive | 1170363 - 1171424 | 38195.4 |
| ankyrin repeat domain-containing protein | CC99x_005040 | Not Available | Positive | 1171620 - 1174790 | 118174.0 |
| hypothetical protein | CC99x_005045 | Not Available | Positive | 1174931 - 1175944 | 39046.8 |
| dhh family phosphoesterase | CC99x_005050 | Not Available | Positive | 1175974 - 1177746 | 65182.8 |
| peptide chain release factor 2 | CC99x_005055 | Not Available | Positive | 1178090 - 1179188 | 41782.3 |
| lysine--trna ligase | CC99x_005060 | Not Available | Positive | 1179190 - 1180725 | 59205.5 |
| hdod domain-containing protein | CC99x_005065 | Not Available | Negative | 1180811 - 1181650 | 30741.7 |
| hypothetical protein | CC99x_005070 | Not Available | Negative | 1181746 - 1182813 | 40835.0 |
| duf924 domain-containing protein | CC99x_005075 | Not Available | Positive | 1182898 - 1183503 | 23712.5 |
| succinate dehydrogenase assembly factor 2 | CC99x_005080 | Not Available | Positive | 1183746 - 1184009 | 10403.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.