Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | CC99x_004985 | Not Available | Positive | 1152629 - 1154176 | 57930.2 |
| trna adenosine(34) deaminase tada | CC99x_004990 | Not Available | Positive | 1154341 - 1154829 | 18119.1 |
| phosphoribosylformylglycinamidine synthase | CC99x_004995 | Not Available | Positive | 1154817 - 1158722 | 143621.0 |
| nad-dependent malic enzyme | CC99x_005000 | Not Available | Positive | 1158671 - 1160413 | 64870.2 |
| cytochrome b | CC99x_005005 | Not Available | Negative | 1160554 - 1161099 | 20758.4 |
| hypothetical protein | CC99x_005010 | Not Available | Negative | 1161274 - 1165980 | 179187.0 |
| hypothetical protein | CC99x_005015 | Not Available | Positive | 1166207 - 1167358 | 44465.1 |
| hypothetical protein | CC99x_005020 | Not Available | Negative | 1167351 - 1167722 | 13732.5 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CC99x_005025 | Not Available | Positive | 1167808 - 1169022 | 44885.3 |
| homoserine dehydrogenase | CC99x_005030 | Not Available | Positive | 1169009 - 1170325 | 47607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.