Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gyri-like domain-containing protein | CC99x_004935 | Not Available | Positive | 1139160 - 1139648 | 18458.9 |
| enoyl-acp reductase | CC99x_004940 | Not Available | Negative | 1140389 - 1141189 | 28402.2 |
| abc transporter substrate-binding protein | CC99x_004945 | Not Available | Positive | 1141372 - 1143531 | 82794.4 |
| abc transporter permease | CC99x_004950 | Not Available | Positive | 1143554 - 1144531 | 36827.1 |
| abc transporter permease | CC99x_004955 | Not Available | Positive | 1144568 - 1145968 | 52740.7 |
| abc transporter atp-binding protein | CC99x_004960 | Not Available | Positive | 1145965 - 1148046 | 78355.8 |
| hypothetical protein | CC99x_004965 | Not Available | Positive | 1148204 - 1149223 | 39449.7 |
| hypothetical protein | CC99x_004970 | Not Available | Positive | 1149374 - 1149685 | 11959.5 |
| exodeoxyribonuclease vii large subunit | CC99x_004975 | Not Available | Negative | 1149698 - 1151056 | 51479.6 |
| imp dehydrogenase | CC99x_004980 | Not Available | Positive | 1151139 - 1152611 | 53019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.