Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3638 domain-containing protein | CC99x_004885 | Not Available | Negative | 1116470 - 1126072 | 369817.0 |
| metq/nlpa family abc transporter substrate-binding protein | CC99x_004890 | Not Available | Negative | 1126282 - 1127079 | 29845.0 |
| abc transporter permease | CC99x_004895 | Not Available | Negative | 1127051 - 1127692 | 23193.4 |
| methionine abc transporter atp-binding protein | CC99x_004900 | Not Available | Negative | 1127673 - 1128734 | 39558.6 |
| hypothetical protein | CC99x_004905 | Not Available | Negative | 1128949 - 1129719 | 28804.5 |
| pd-(d/e)xk nuclease family protein | CC99x_004910 | Not Available | Positive | 1129889 - 1132552 | 102074.0 |
| uvrd-helicase domain-containing protein | CC99x_004915 | Not Available | Positive | 1132545 - 1136075 | 135988.0 |
| 5'-nucleotidase | CC99x_004920 | Not Available | Positive | 1136387 - 1137289 | 33486.6 |
| hypothetical protein | CC99x_004925 | Not Available | Positive | 1137476 - 1137676 | 7386.61 |
| hypothetical protein | CC99x_004930 | Not Available | Positive | 1137891 - 1139045 | 44188.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.