Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_000370 | Not Available | Positive | 87430 - 87828 | 15833.7 |
| hypothetical protein | CC99x_000375 | Not Available | Positive | 88084 - 88887 | 29958.5 |
| atp-binding cassette domain-containing protein | CC99x_000380 | Not Available | Positive | 88930 - 90726 | 67342.9 |
| atp-binding cassette domain-containing protein | CC99x_000385 | Not Available | Positive | 90719 - 92521 | 67524.0 |
| ld-carboxypeptidase | CC99x_000390 | Not Available | Positive | 92572 - 93489 | 33424.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | CC99x_000395 | Not Available | Positive | 93738 - 94751 | 37245.0 |
| mfs transporter | CC99x_000400 | Not Available | Positive | 94828 - 96027 | 44305.3 |
| gnat family n-acetyltransferase | CC99x_000405 | Not Available | Negative | 96317 - 97213 | 34185.1 |
| type ii toxin-antitoxin system hipa family toxin | CC99x_000410 | Not Available | Negative | 97550 - 98803 | 48550.0 |
| helix-turn-helix domain-containing protein | CC99x_000415 | Not Available | Negative | 98831 - 99103 | 9981.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.