Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709261 bp
Thymine Count
713664 bp
Guanine Count
1367400 bp
Cytosine Count
1359477 bp
Genome Length
4149802 bp
Protein-coding Genes
3840 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN06295955_12610 | Not Available | Positive | 4100227 - 4103007 | 98718.6 |
| integrase core domain-containing protein | SAMN06295955_12611 | Not Available | Negative | 4103124 - 4103513 | 14439.3 |
| high-affinity iron transporter | SAMN06295955_1271 | Not Available | Negative | 4103589 - 4104995 | 49223.0 |
| cation diffusion facilitator family transporter | SAMN06295955_1272 | Not Available | Negative | 4105048 - 4105683 | 22024.8 |
| transcriptional regulator, merr family | SAMN06295955_1273 | Not Available | Positive | 4105739 - 4106161 | 15239.5 |
| cation efflux family protein | SAMN06295955_1274 | Not Available | Negative | 4106214 - 4106819 | 21289.0 |
| cobalt-zinc-cadmium resistance protein czca | SAMN06295955_1275 | Not Available | Negative | 4106936 - 4110097 | 112740.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN06295955_1276 | Not Available | Negative | 4110115 - 4111377 | 44824.3 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN06295955_1277 | Not Available | Negative | 4111374 - 4112609 | 45199.8 |
| hypothetical protein | SAMN06295955_1278 | Not Available | Negative | 4112675 - 4113013 | 11678.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
