Sphingopyxis indica

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis indica is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, which suggests a reliance on active metabolic processes for survival rather than the formation of resilient spores. Its Gram-negative cell wall structure is indicative of a complex outer membrane, which may contribute to its adaptability in various ecological niches. The specific growth conditions and physiological traits of Sphingopyxis indica suggest that it may play a role in the degradation of organic compounds, a characteristic common among members of the Sphingopyxis genus. This capability is particularly relevant in environments where organic matter is abundant, such as soil and water systems. Moreover, the aerobic nature of Sphingopyxis indica implies a potential involvement in biogeochemical cycles, particularly those involving oxygen-dependent processes. The ability to thrive at an optimal temperature of 29.0°C positions this organism within a temperate range, which may influence its distribution in various habitats. Overall, Sphingopyxis indica exemplifies the diverse metabolic strategies employed by bacteria within its genus, highlighting its potential contributions to ecological processes such as nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis indica strain DS15 genome assembly, contig:

Gene Summary

Adenine Count

709261 bp

Thymine Count

713664 bp

Guanine Count

1367400 bp

Cytosine Count

1359477 bp

Genome Length

4149802 bp

Protein-coding Genes

3840 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
preprotein translocase subunit secdSAMN06295955_101296Not AvailablePositive344064 - 34567757604.9
protein translocase subunit secfSAMN06295955_101297Not AvailablePositive345694 - 34667735458.7
heme exporter protein cSAMN06295955_101298Not AvailablePositive346961 - 34769526269.7
heme exporter protein d (ccmd)SAMN06295955_101299Not AvailablePositive347700 - 3478555594.72
cytochrome c-type biogenesis protein ccmeSAMN06295955_101300Not AvailablePositive347852 - 34828915048.5
cytochrome c-type biogenesis protein ccmfSAMN06295955_101301Not AvailablePositive348411 - 35037569563.5
cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbeSAMN06295955_101302Not AvailablePositive350372 - 35090219096.4
cytochrome c-type biogenesis protein ccmhSAMN06295955_101303Not AvailablePositive350899 - 35142618824.7
hypothetical proteinSAMN06295955_101304Not AvailablePositive351423 - 35207022392.8
kup system potassium uptake proteinSAMN06295955_101305Not AvailablePositive352113 - 35407170618.8

Displaying genes 351 – 360 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.