Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709261 bp
Thymine Count
713664 bp
Guanine Count
1367400 bp
Cytosine Count
1359477 bp
Genome Length
4149802 bp
Protein-coding Genes
3840 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0176 protein | SAMN06295955_1189 | Not Available | Negative | 3746237 - 3746965 | 26155.2 |
| choline dehydrogenase | SAMN06295955_11810 | Not Available | Negative | 3747017 - 3749020 | 71882.4 |
| dj-1/pfpi family protein | SAMN06295955_11811 | Not Available | Negative | 3749157 - 3749771 | 21256.7 |
| hypothetical protein | SAMN06295955_11812 | Not Available | Positive | 3749921 - 3751099 | 45378.2 |
| hypothetical protein | SAMN06295955_11813 | Not Available | Positive | 3751106 - 3751807 | 26876.4 |
| uncharacterized membrane protein yoat, duf817 family | SAMN06295955_11814 | Not Available | Positive | 3751800 - 3752651 | 32630.6 |
| xaa-pro dipeptidase | SAMN06295955_11815 | Not Available | Negative | 3752655 - 3753902 | 44376.0 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN06295955_11816 | Not Available | Negative | 3753915 - 3755132 | 45061.8 |
| hypothetical protein | SAMN06295955_11817 | Not Available | Negative | 3755129 - 3755665 | 19504.8 |
| tyrosyl-trna synthetase | SAMN06295955_11818 | Not Available | Positive | 3755735 - 3756961 | 44802.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
