Sphingopyxis indica

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis indica is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, which suggests a reliance on active metabolic processes for survival rather than the formation of resilient spores. Its Gram-negative cell wall structure is indicative of a complex outer membrane, which may contribute to its adaptability in various ecological niches. The specific growth conditions and physiological traits of Sphingopyxis indica suggest that it may play a role in the degradation of organic compounds, a characteristic common among members of the Sphingopyxis genus. This capability is particularly relevant in environments where organic matter is abundant, such as soil and water systems. Moreover, the aerobic nature of Sphingopyxis indica implies a potential involvement in biogeochemical cycles, particularly those involving oxygen-dependent processes. The ability to thrive at an optimal temperature of 29.0°C positions this organism within a temperate range, which may influence its distribution in various habitats. Overall, Sphingopyxis indica exemplifies the diverse metabolic strategies employed by bacteria within its genus, highlighting its potential contributions to ecological processes such as nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis indica strain DS15 genome assembly, contig:

Gene Summary

Adenine Count

709261 bp

Thymine Count

713664 bp

Guanine Count

1367400 bp

Cytosine Count

1359477 bp

Genome Length

4149802 bp

Protein-coding Genes

3840 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb10SAMN06295955_11141Not AvailableNegative3104950 - 310616142127.1
type iv secretion system protein virb9SAMN06295955_11142Not AvailableNegative3106158 - 310700931017.1
type iv secretion system protein virb5SAMN06295955_11143Not AvailableNegative3107006 - 310768925254.8
type iv secretion system protein trblSAMN06295955_11144Not AvailableNegative3107696 - 310897642198.3
conjugative transfer region protein trbkSAMN06295955_11145Not AvailableNegative3108973 - 31092278892.54
p-type conjugative transfer protein trbjSAMN06295955_11146Not AvailableNegative3109229 - 310994825148.1
type iv secretion system protein virb4SAMN06295955_11147Not AvailableNegative3109962 - 311239788528.7
type iv secretion system protein virb3SAMN06295955_11148Not AvailableNegative3112394 - 31126639657.05
type iv secretion system protein virb2SAMN06295955_11149Not AvailableNegative3112663 - 311299511356.1
type iv secretion system protein virb11SAMN06295955_11150Not AvailableNegative3112992 - 311397534843.2

Displaying genes 2901 – 2910 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.