Sphingopyxis indica

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis indica is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, which suggests a reliance on active metabolic processes for survival rather than the formation of resilient spores. Its Gram-negative cell wall structure is indicative of a complex outer membrane, which may contribute to its adaptability in various ecological niches. The specific growth conditions and physiological traits of Sphingopyxis indica suggest that it may play a role in the degradation of organic compounds, a characteristic common among members of the Sphingopyxis genus. This capability is particularly relevant in environments where organic matter is abundant, such as soil and water systems. Moreover, the aerobic nature of Sphingopyxis indica implies a potential involvement in biogeochemical cycles, particularly those involving oxygen-dependent processes. The ability to thrive at an optimal temperature of 29.0°C positions this organism within a temperate range, which may influence its distribution in various habitats. Overall, Sphingopyxis indica exemplifies the diverse metabolic strategies employed by bacteria within its genus, highlighting its potential contributions to ecological processes such as nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis indica strain DS15 genome assembly, contig:

Gene Summary

Adenine Count

709261 bp

Thymine Count

713664 bp

Guanine Count

1367400 bp

Cytosine Count

1359477 bp

Genome Length

4149802 bp

Protein-coding Genes

3840 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, laci familySAMN06295955_109115Not AvailableNegative2787222 - 278827738040.7
2-keto-4-pentenoate hydrataseSAMN06295955_109116Not AvailablePositive2788455 - 278924327750.2
mfs transporter, acs family, hexuronate transporterSAMN06295955_109117Not AvailablePositive2789268 - 279055747206.9
glucuronate isomeraseSAMN06295955_109118Not AvailablePositive2790568 - 279198052338.3
fructuronate reductaseSAMN06295955_109119Not AvailablePositive2791977 - 279330246548.4
transcriptional regulator, xre family with cupin sensorSAMN06295955_109120Not AvailableNegative2793312 - 279393523167.7
cubico group peptidase, beta-lactamase class c familySAMN06295955_109121Not AvailablePositive2794079 - 279606471387.9
l-alanine-dl-glutamate epimeraseSAMN06295955_109122Not AvailablePositive2796064 - 279707135814.1
outer membrane receptor proteins, mostly fe transportSAMN06295955_109123Not AvailablePositive2797233 - 279942277412.6
uncharacterized conserved protein, nad-dependent epimerase/dehydratase familySAMN06295955_109124Not AvailablePositive2799444 - 280048435546.8

Displaying genes 2651 – 2660 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.