Sphingopyxis indica

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis indica is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, which suggests a reliance on active metabolic processes for survival rather than the formation of resilient spores. Its Gram-negative cell wall structure is indicative of a complex outer membrane, which may contribute to its adaptability in various ecological niches. The specific growth conditions and physiological traits of Sphingopyxis indica suggest that it may play a role in the degradation of organic compounds, a characteristic common among members of the Sphingopyxis genus. This capability is particularly relevant in environments where organic matter is abundant, such as soil and water systems. Moreover, the aerobic nature of Sphingopyxis indica implies a potential involvement in biogeochemical cycles, particularly those involving oxygen-dependent processes. The ability to thrive at an optimal temperature of 29.0°C positions this organism within a temperate range, which may influence its distribution in various habitats. Overall, Sphingopyxis indica exemplifies the diverse metabolic strategies employed by bacteria within its genus, highlighting its potential contributions to ecological processes such as nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis indica strain DS15 genome assembly, contig:

Gene Summary

Adenine Count

709261 bp

Thymine Count

713664 bp

Guanine Count

1367400 bp

Cytosine Count

1359477 bp

Genome Length

4149802 bp

Protein-coding Genes

3840 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglutaminase-like superfamily proteinSAMN06295955_108123Not AvailablePositive2583326 - 258400925314.5
asparagine synthase (glutamine-hydrolysing)SAMN06295955_108124Not AvailablePositive2584009 - 258574564493.2
outer membrane receptor for ferrienterochelin and colicinsSAMN06295955_108125Not AvailableNegative2587839 - 259043692707.9
fecr family proteinSAMN06295955_108126Not AvailableNegative2590551 - 259163939455.9
rna polymerase, sigma-24 subunit, rpoeSAMN06295955_108127Not AvailableNegative2591636 - 259223822264.4
predicted nucleotidyltransferase component of viral defense systemSAMN06295955_108128Not AvailableNegative2592533 - 259339931832.0
transcriptional regulator, abiei antitoxin, type iv ta systemSAMN06295955_108129Not AvailableNegative2593392 - 259401222739.5
predicted nucleotidyltransferaseSAMN06295955_108130Not AvailableNegative2594194 - 259512636325.6
transcriptional regulator, abrb familySAMN06295955_108131Not AvailablePositive2595287 - 25955328479.17
pin domain nuclease, a component of toxin-antitoxin system (pin domain)SAMN06295955_108132Not AvailablePositive2595529 - 259591813337.3

Displaying genes 2451 – 2460 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.