Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709261 bp
Thymine Count
713664 bp
Guanine Count
1367400 bp
Cytosine Count
1359477 bp
Genome Length
4149802 bp
Protein-coding Genes
3840 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator protein | SAMN06295955_10893 | Not Available | Positive | 2555631 - 2556515 | 33796.9 |
| protein of unknown function | SAMN06295955_10894 | Not Available | Positive | 2556802 - 2557320 | 19650.5 |
| conjugative transfer signal peptidase traf | SAMN06295955_10895 | Not Available | Positive | 2557317 - 2557916 | 21123.1 |
| uncharacterized conserved protein, duf736 family | SAMN06295955_10896 | Not Available | Positive | 2557907 - 2558251 | 12484.8 |
| transglycosylase slt domain-containing protein | SAMN06295955_10897 | Not Available | Positive | 2558255 - 2559043 | 27082.4 |
| type iv secretory pathway, vird2 components (relaxase) | SAMN06295955_10898 | Not Available | Positive | 2559252 - 2561033 | 64949.2 |
| type iv secretion system protein vird4 | SAMN06295955_10899 | Not Available | Positive | 2561068 - 2563131 | 75618.5 |
| hypothetical protein | SAMN06295955_108100 | Not Available | Positive | 2563128 - 2563580 | 16938.9 |
| fic family protein | SAMN06295955_108101 | Not Available | Negative | 2563553 - 2564659 | 41174.2 |
| hypothetical protein | SAMN06295955_108102 | Not Available | Negative | 2564822 - 2565028 | 6845.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
