Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709261 bp
Thymine Count
713664 bp
Guanine Count
1367400 bp
Cytosine Count
1359477 bp
Genome Length
4149802 bp
Protein-coding Genes
3840 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa-ompf porin, oop family | SAMN06295955_104138 | Not Available | Negative | 1727408 - 1727905 | 17781.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295955_104139 | Not Available | Negative | 1727928 - 1729127 | 43062.8 |
| protein of unknown function | SAMN06295955_104140 | Not Available | Negative | 1729124 - 1729660 | 18648.7 |
| peptide-methionine (s)-s-oxide reductase | SAMN06295955_104141 | Not Available | Negative | 1729796 - 1730332 | 19346.5 |
| hypothetical protein | SAMN06295955_104142 | Not Available | Negative | 1730388 - 1731389 | 35197.6 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN06295955_104143 | Not Available | Positive | 1731739 - 1732857 | 40686.3 |
| lsu ribosomal protein l13p | SAMN06295955_104144 | Not Available | Positive | 1733036 - 1733515 | 17513.4 |
| ssu ribosomal protein s9p | SAMN06295955_104145 | Not Available | Positive | 1733515 - 1734012 | 18033.6 |
| phosphotransferase enzyme family protein | SAMN06295955_104146 | Not Available | Negative | 1734319 - 1735365 | 37318.4 |
| hypothetical protein | SAMN06295955_104147 | Not Available | Negative | 1735362 - 1736453 | 39680.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
