Sphingopyxis indica

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis indica is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of approximately 29.0°C. This microbe is characterized by its non-spore-forming nature, which suggests a reliance on active metabolic processes for survival rather than the formation of resilient spores. Its Gram-negative cell wall structure is indicative of a complex outer membrane, which may contribute to its adaptability in various ecological niches. The specific growth conditions and physiological traits of Sphingopyxis indica suggest that it may play a role in the degradation of organic compounds, a characteristic common among members of the Sphingopyxis genus. This capability is particularly relevant in environments where organic matter is abundant, such as soil and water systems. Moreover, the aerobic nature of Sphingopyxis indica implies a potential involvement in biogeochemical cycles, particularly those involving oxygen-dependent processes. The ability to thrive at an optimal temperature of 29.0°C positions this organism within a temperate range, which may influence its distribution in various habitats. Overall, Sphingopyxis indica exemplifies the diverse metabolic strategies employed by bacteria within its genus, highlighting its potential contributions to ecological processes such as nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis indica strain DS15 genome assembly, contig:

Gene Summary

Adenine Count

709261 bp

Thymine Count

713664 bp

Guanine Count

1367400 bp

Cytosine Count

1359477 bp

Genome Length

4149802 bp

Protein-coding Genes

3840 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
secretin and tonb n terminus short domain-containing proteinSAMN06295955_102227Not AvailablePositive1219119 - 1222343118218.0
hypothetical proteinSAMN06295955_102228Not AvailablePositive1222502 - 122299916121.0
hypothetical proteinSAMN06295955_102229Not AvailablePositive1223177 - 122540879411.2
hypothetical proteinSAMN06295955_102230Not AvailableNegative1225569 - 122656735447.5
tonb-dependent receptor plug domainSAMN06295955_102231Not AvailableNegative1226567 - 1229680113009.0
aerobic c4-dicarboxylate transport proteinSAMN06295955_102232Not AvailableNegative1229724 - 123106146259.7
two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctbSAMN06295955_102233Not AvailablePositive1231285 - 123308764751.9
two-component system, ntrc family, c4-dicarboxylate transport response regulator dctdSAMN06295955_102234Not AvailablePositive1233084 - 123442449309.7
cubico group peptidase, beta-lactamase class c familySAMN06295955_102235Not AvailablePositive1234593 - 123564237041.5
dna-binding transcriptional regulator, marr familySAMN06295955_102236Not AvailablePositive1235639 - 123614518404.0

Displaying genes 1171 – 1180 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.