Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | KNU-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1039914 bp
Thymine Count
1041427 bp
Guanine Count
2096432 bp
Cytosine Count
2092644 bp
Genome Length
6270417 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | CNO08_RS12050 | Not Available | Negative | 2967264 - 2967908 | 22846.4 |
| tetratricopeptide repeat protein | CNO08_RS12055 | Not Available | Positive | 2968137 - 2968721 | 20390.0 |
| type vi secretion system contractile sheath small subunit | CNO08_RS12060 | Not Available | Positive | 2968764 - 2969270 | 18914.7 |
| type vi secretion system contractile sheath large subunit | CNO08_RS12065 | Not Available | Positive | 2969273 - 2970766 | 54978.8 |
| hcp family type vi secretion system effector | CNO08_RS12070 | Not Available | Positive | 2970911 - 2971444 | 19345.7 |
| type vi secretion system baseplate subunit tsse | CNO08_RS12075 | Not Available | Positive | 2971796 - 2972284 | 18115.6 |
| type vi secretion system baseplate subunit tssf | CNO08_RS12080 | Not Available | Positive | 2972298 - 2974133 | 67961.5 |
| type vi secretion system baseplate subunit tssg | CNO08_RS12085 | Not Available | Positive | 2974097 - 2975185 | 41272.3 |
| type vi secretion system atpase tssh | CNO08_RS12090 | Not Available | Positive | 2975308 - 2978079 | 100201.0 |
| type vi secretion system vgr family protein | CNO08_RS12095 | Not Available | Positive | 2978381 - 2981206 | 100099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
