Lysobacter capsici str. KNU-14

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter capsici strain KNU-14 is a rod-shaped bacterium that thrives in chromium-contaminated environments, specifically in water and on the leaves of ready-to-eat lettuce plants. This strain has been isolated from both chromium-contaminated water sources and Cr-contaminated plant water, indicating its potential adaptability to environments polluted with heavy metals. The presence of L. capsici KNU-14 in these habitats suggests it may play a role in the microbial community associated with contaminated sites, potentially contributing to bioremediation processes. Its ability to inhabit both aquatic and plant surfaces raises interesting questions about its ecological interactions and survival strategies in adverse conditions. Understanding its metabolic pathways and ecological functions may provide insights into the mechanisms by which it copes with heavy metal stress, as well as its potential applications in environmental microbiology. This unique habitat preference not only highlights the versatility of L. capsici KNU-14 but also underscores the importance of studying microorganisms in contaminated ecosystems, where they may contribute to the detoxification of harmful substances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter capsici
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter capsici str. KNU-14

Accession NumberNZ_CP023465.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5122 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail sheath proteinCNO08_RS11630Not Available-2850083 - 285199370089.5
chromosomal replication initiator protein dnaaCNO08_RS00005Not Available+1 - 133550347.5
dna polymerase iii subunit betaCNO08_RS00010Not Available+2212 - 331240958.2
dna replication/repair protein recfCNO08_RS00015Not Available+3860 - 494540279.1
dna topoisomerase (atp-hydrolyzing) subunit bCNO08_RS00020Not Available+5452 - 793591314.9
cpbp family intramembrane glutamic endopeptidaseCNO08_RS00025Not Available+8108 - 877923869.3
m48 family metallopeptidaseCNO08_RS00030Not Available+8892 - 969528242.6
tetratricopeptide repeat proteinCNO08_RS00035Not Available+9833 - 1105644516.6
energy transducer tonbCNO08_RS00040Not Available+11203 - 1188024105.7
mota/tolq/exbb proton channel family proteinCNO08_RS00045Not Available+11964 - 1271327217.5

Displaying genes 11 – 20 of 5190 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites