Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system lipoprotein tssjDM483_02590Not AvailableNegative552461 - 55325829001.5
phosphopeptide-binding proteinDM483_02595Not AvailableNegative553255 - 55382420581.4
type vi secretion system baseplate subunit tssgDM483_02600Not AvailableNegative553821 - 55483738589.3
type vi secretion system baseplate subunit tssfDM483_02605Not AvailableNegative554801 - 55656766576.8
type vi secretion system baseplate subunit tsseDM483_02610Not AvailableNegative556571 - 55698115623.6
type vi secretion system contractile sheath large subunitDM483_02615Not AvailableNegative556978 - 55846855979.2
type vi secretion system contractile sheath small subunitDM483_02620Not AvailableNegative558486 - 55898918595.3
type vi secretion system-associated protein tagoDM483_02625Not AvailablePositive559406 - 55996620211.1
type vi secretion system protein tssaDM483_02630Not AvailablePositive559954 - 56141753451.2
type vi secretion system membrane subunit tssmDM483_02635Not AvailablePositive561414 - 565034135344.0

Displaying genes 741 – 750 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.