Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock proteinDM483_02390Not AvailableNegative510212 - 5104217640.02
dctp deaminaseDM483_02395Not AvailablePositive510749 - 51131521234.2
hypothetical proteinDM483_02400Not AvailablePositive511410 - 5116377806.4
ligase-associated dna damage response endonuclease pdemDM483_02405Not AvailableNegative511644 - 51229424274.3
ligase-associated dna damage response dexh box helicaseDM483_02410Not AvailableNegative512291 - 51474190234.1
succinylglutamate desuccinylaseDM483_02415Not AvailableNegative514810 - 51592540907.2
atp-dependent dna ligaseDM483_02420Not AvailableNegative516039 - 51769762125.7
ligase-associated dna damage response exonucleaseDM483_02425Not AvailableNegative517694 - 51871037252.2
penicillin acylase family proteinDM483_02430Not AvailableNegative518837 - 52127888734.2
plp-dependent aminotransferase family proteinDM483_02435Not AvailableNegative521382 - 52272250380.9

Displaying genes 701 – 710 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.