Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspgDM483_02135Not AvailablePositive453657 - 45409116147.6
type ii secretion system protein gsphDM483_02140Not AvailablePositive454095 - 45452615760.0
prepilin-type n-terminal cleavage/methylation domain-containing proteinDM483_02145Not AvailablePositive454523 - 45489113942.9
type ii secretion pathway protein xcpwDM483_02150Not AvailablePositive454888 - 45547822375.2
type ii secretion system protein gsplDM483_02155Not AvailablePositive455463 - 45655140595.8
type ii secretion system protein gspmDM483_02160Not AvailablePositive456548 - 45693414519.7
general secretion pathway protein gspnDM483_02165Not AvailablePositive456931 - 45759324583.6
siderophore-interacting proteinDM483_02170Not AvailableNegative457753 - 45851428124.6
padr family transcriptional regulatorDM483_02175Not AvailableNegative458507 - 45905220314.2
penicillin-binding proteinDM483_02180Not AvailableNegative459142 - 462291117049.0

Displaying genes 651 – 660 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.