Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin-arginine translocase subunit tatcDM483_02085Not AvailableNegative442343 - 44310427877.4
twin-arginine translocase subunit tatbDM483_02090Not AvailableNegative443101 - 44339110438.8
twin-arginine translocase tata/tate family subunitDM483_02095Not AvailableNegative443391 - 4436248152.84
general secretion pathway protein gspkDM483_02100Not AvailablePositive443770 - 44473535806.9
phox family phosphataseDM483_02105Not AvailableNegative444865 - 44694074350.0
lipoprotein uxpaDM483_02110Not AvailablePositive447165 - 44880558998.2
pilus assembly protein pilzDM483_02115Not AvailablePositive448805 - 44922715002.3
type ii secretion system protein gspdDM483_02120Not AvailablePositive449249 - 45098561640.3
type ii secretion system protein gspeDM483_02125Not AvailablePositive450985 - 45243352356.4
type ii secretion system protein gspfDM483_02130Not AvailablePositive452437 - 45363943544.0

Displaying genes 641 – 650 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.