Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDM483_27775Not AvailablePositive5830259 - 58305439771.75
hypothetical proteinDM483_27780Not AvailablePositive5830876 - 583135417785.1
glucose-6-phosphate isomeraseDM483_27785Not AvailableNegative5831355 - 583181617257.7
pantoate--beta-alanine ligaseDM483_27790Not AvailableNegative5832023 - 583288631191.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseDM483_27795Not AvailableNegative5832883 - 583368327763.8
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDM483_27800Not AvailableNegative5833946 - 583442517482.1
polynucleotide adenylyltransferase pcnbDM483_27805Not AvailableNegative5834422 - 583580452724.1
sigma-54-dependent fis family transcriptional regulatorDM483_27810Not AvailableNegative5836584 - 583802652588.6
pas domain s-box proteinDM483_27815Not AvailableNegative5838031 - 5841000109095.0
hypothetical proteinDM483_27820Not AvailableNegative5840990 - 58411666991.78

Displaying genes 5381 – 5390 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.