Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDM483_25825Not AvailablePositive5428227 - 542894926355.1
lysr family transcriptional regulatorDM483_25830Not AvailablePositive5429076 - 543000233347.9
sdr family nad(p)-dependent oxidoreductaseDM483_25835Not AvailablePositive5430171 - 543094726777.2
wyl domain-containing proteinDM483_25840Not AvailableNegative5430959 - 543151320148.3
rhs repeat-associated core domain-containing proteinDM483_25845Not AvailableNegative5431747 - 543262832690.0
plp-dependent aminotransferase family proteinDM483_25850Not AvailableNegative5432879 - 543430353100.2
amino acid permeaseDM483_25855Not AvailablePositive5434628 - 543604050989.4
hypothetical proteinDM483_25860Not AvailableNegative5436044 - 54362236403.82
trans-aconitate 2-methyltransferaseDM483_25865Not AvailablePositive5436338 - 543711429081.7
duf2784 domain-containing proteinDM483_25870Not AvailableNegative5437104 - 543747513865.4

Displaying genes 5021 – 5030 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.