Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane porin, oprd familyDM483_25460Not AvailableNegative5350306 - 535155645613.4
benzoate transporterDM483_25465Not AvailableNegative5351611 - 535281041516.0
catechol 1,2-dioxygenaseDM483_25470Not AvailableNegative5352957 - 535387133518.2
mfs transporterDM483_25475Not AvailableNegative5353901 - 535522947041.9
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseDM483_25480Not AvailableNegative5355287 - 535604827088.2
nadh oxidaseDM483_25485Not AvailableNegative5356183 - 535719336500.3
benzoate 1,2-dioxygenase small subunitDM483_25490Not AvailableNegative5357266 - 535775119160.1
benzoate 1,2-dioxygenase large subunitDM483_25495Not AvailableNegative5357748 - 535910651491.4
hypothetical proteinDM483_25500Not AvailableNegative5359190 - 536011934265.5
arac family transcriptional regulatorDM483_25505Not AvailableNegative5360214 - 536117036406.6

Displaying genes 4951 – 4960 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.