Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine-specific translation elongation factorDM483_24840Not AvailableNegative5219673 - 522159570145.7
l-seryl-trna(sec) selenium transferaseDM483_24845Not AvailableNegative5221592 - 522301951726.8
formate dehydrogenase accessory protein fdheDM483_24850Not AvailableNegative5223164 - 522409033090.0
formate dehydrogenase subunit gammaDM483_24855Not AvailableNegative5224095 - 522475124956.9
formate dehydrogenase subunit betaDM483_24860Not AvailableNegative5224748 - 522569834556.1
formate dehydrogenase-n subunit alphaDM483_24865Not AvailableNegative5225698 - 522816391496.4
sulfate abc transporter substrate-binding proteinDM483_24870Not AvailableNegative5228176 - 522876621428.6
sdr family nad(p)-dependent oxidoreductaseDM483_24875Not AvailableNegative5228914 - 522967526864.5
hypothetical proteinDM483_24880Not AvailableNegative5229697 - 523048227786.9
plp-dependent aminotransferase family proteinDM483_24885Not AvailablePositive5230683 - 523206550448.4

Displaying genes 4831 – 4840 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.