Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate-nucleotide adenylyltransferaseDM483_23795Not AvailablePositive5003924 - 500461625292.3
ribosome silencing factorDM483_23800Not AvailablePositive5004660 - 500507915617.4
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDM483_23805Not AvailablePositive5005090 - 500555717669.6
penicillin-binding protein 2DM483_23810Not AvailablePositive5005574 - 500746370233.4
rod shape-determining protein rodaDM483_23815Not AvailablePositive5007460 - 500860541852.8
lytic murein transglycosylase bDM483_23820Not AvailablePositive5008623 - 500963337786.9
septal ring lytic transglycosylase rlpa family proteinDM483_23825Not AvailablePositive5009633 - 501063435871.6
d-alanyl-d-alanine carboxypeptidaseDM483_23830Not AvailablePositive5010855 - 501201542290.8
duf493 family proteinDM483_23835Not AvailablePositive5012089 - 501236410137.3
lipoyl(octanoyl) transferase lipbDM483_23840Not AvailablePositive5012364 - 501301123559.5

Displaying genes 4631 – 4640 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.