Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na+/h+ antiporter nhaaDM483_22535Not AvailableNegative4764455 - 476581647777.5
high-affinity choline transporter bettDM483_22540Not AvailablePositive4766120 - 476809372793.9
duf1850 domain-containing proteinDM483_22545Not AvailableNegative4768121 - 476853715305.2
trap transporter permeaseDM483_22550Not AvailableNegative4768534 - 477056172070.2
c4-dicarboxylate abc transporterDM483_22555Not AvailableNegative4770589 - 477153933240.9
trkh family potassium uptake proteinDM483_22560Not AvailableNegative4771644 - 477309852238.1
3-oxoadipate coa-transferaseDM483_22565Not AvailableNegative4773366 - 477400722553.2
3-oxoacid coa-transferase subunit aDM483_22570Not AvailableNegative4774016 - 477471124320.4
methyl-accepting chemotaxis proteinDM483_22575Not AvailablePositive4775102 - 477726779345.2
tetr family transcriptional regulatorDM483_22580Not AvailablePositive4777472 - 477811024149.1

Displaying genes 4441 – 4450 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.