Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine proteaseDM483_01035Not AvailableNegative221277 - 22192423166.0
Trna-leuNot AvailableNot AvailablePositive222186 - 222270Not Available
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDM483_01045Not AvailablePositive222376 - 22342538367.0
trna guanosine(34) transglycosylase tgtDM483_01050Not AvailablePositive223422 - 22455542073.0
preprotein translocase subunit yajcDM483_01055Not AvailablePositive224598 - 22493311902.6
protein translocase subunit secdDM483_01060Not AvailablePositive224997 - 22685966917.8
protein translocase subunit secfDM483_01065Not AvailablePositive226870 - 22777832760.2
glycine zipper 2tm domain-containing proteinDM483_01070Not AvailablePositive227897 - 22843918514.2
inositol monophosphataseDM483_01075Not AvailableNegative228608 - 22942629755.4
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjDM483_01080Not AvailablePositive229578 - 23033327470.2

Displaying genes 431 – 440 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.