Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding proteinDM483_22000Not AvailableNegative4663759 - 466473035585.2
smp-30/gluconolactonase/lre family proteinDM483_22005Not AvailableNegative4664795 - 466567632133.8
nad(p)-dependent oxidoreductaseDM483_22010Not AvailableNegative4665699 - 466650529376.7
outer membrane porin, oprd familyDM483_22015Not AvailableNegative4666909 - 466814745257.8
ribonucleotide-diphosphate reductase subunit betaDM483_22030Not AvailableNegative4670147 - 467139746991.9
ribonucleoside-diphosphate reductase subunit alphaDM483_22035Not AvailableNegative4672110 - 4674989106955.0
hypothetical proteinDM483_22040Not AvailablePositive4674996 - 467534612379.2
dna-binding response regulatorDM483_22045Not AvailablePositive4675738 - 467643626053.6
hamp domain-containing proteinDM483_22050Not AvailablePositive4676433 - 467804059397.2
4'-phosphopantetheinyl transferaseDM483_22055Not AvailableNegative4678044 - 467874525718.8

Displaying genes 4341 – 4350 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.