Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar assembly protein flihDM483_20025Not AvailableNegative4235839 - 423663029904.1
flagellar motor switch protein fligDM483_20030Not AvailableNegative4236793 - 423781237024.5
flagellar basal body m-ring protein flifDM483_20035Not AvailableNegative4237805 - 423958363093.8
flagellar hook-basal body complex protein flieDM483_20040Not AvailableNegative4239599 - 423993111878.5
sigma-54-dependent fis family transcriptional regulatorDM483_20045Not AvailableNegative4240195 - 424155049061.3
pas domain-containing sensor histidine kinaseDM483_20050Not AvailableNegative4241550 - 424276743962.9
sigma-54-dependent fis family transcriptional regulatorDM483_20055Not AvailableNegative4242995 - 424447055554.8
flagellar protein flitDM483_20060Not AvailableNegative4244641 - 424493411016.1
flagella export chaperone flisDM483_20065Not AvailableNegative4244953 - 424534814498.5
flagellar cap protein flidDM483_20070Not AvailableNegative4245431 - 424678946524.6

Displaying genes 3961 – 3970 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.