Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2164 domain-containing proteinDM483_16565Not AvailablePositive3492884 - 349314410050.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDM483_16570Not AvailablePositive3493172 - 349390925908.3
imidazole glycerol phosphate synthase cyclase subunitDM483_16575Not AvailablePositive3493920 - 349469027132.5
choline abc transporter atp-binding proteinDM483_16585Not AvailableNegative3494808 - 349598643727.4
choline abc transporter permease subunitDM483_16590Not AvailableNegative3495983 - 349682830328.2
choline abc transporter substrate-binding proteinDM483_16595Not AvailableNegative3496913 - 349786034570.5
l-serine ammonia-lyaseDM483_16600Not AvailablePositive3498313 - 349968949066.9
glxa family transcriptional regulatorDM483_16605Not AvailablePositive3500191 - 350129741126.6
hypothetical proteinDM483_16610Not AvailableNegative3501417 - 35016749117.03
metallopeptidaseDM483_16615Not AvailablePositive3502013 - 350359358123.7

Displaying genes 3291 – 3300 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.