Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase accessory sulfurtransferase fdhdDM483_16355Not AvailableNegative3454037 - 345486729398.4
peptidoglycan-binding protein lysmDM483_16360Not AvailablePositive3455043 - 345548315616.8
gmp/imp nucleotidaseDM483_16365Not AvailableNegative3455534 - 345619625399.4
adp compounds hydrolase nudeDM483_16370Not AvailablePositive3456261 - 345682720948.2
3'(2'),5'-bisphosphate nucleotidaseDM483_16375Not AvailablePositive3456824 - 345764229168.7
thioesteraseDM483_16380Not AvailableNegative3457725 - 345818017017.3
sigma-54-dependent fis family transcriptional regulatorDM483_16385Not AvailableNegative3458180 - 345958650993.2
sensor histidine kinaseDM483_16390Not AvailableNegative3459583 - 346139767434.5
dtdp-4-dehydrorhamnose 3,5-epimeraseDM483_16395Not AvailableNegative3461440 - 346198520316.2
agmatine deiminaseDM483_16400Not AvailablePositive3462263 - 346336940839.0

Displaying genes 3251 – 3260 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.