Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate abc transporter substrate-binding proteinDM483_16095Not AvailablePositive3400121 - 340152750569.2
abc transporter permeaseDM483_16100Not AvailablePositive3401543 - 340232528001.0
abc transporter atp-binding proteinDM483_16105Not AvailablePositive3402325 - 340317631652.6
heat repeat domain-containing proteinDM483_16110Not AvailablePositive3403173 - 340413833667.3
duf971 domain-containing proteinDM483_16115Not AvailablePositive3404138 - 340441910361.4
nad-dependent succinate-semialdehyde dehydrogenaseDM483_16125Not AvailablePositive3404904 - 340634651552.0
5-aminovalerate aminotransferase davtDM483_16130Not AvailablePositive3406529 - 340780644826.8
hdod domain-containing proteinDM483_16135Not AvailablePositive3407945 - 340920445297.2
ggdef domain-containing proteinDM483_16140Not AvailableNegative3409295 - 341032338430.2
acyl-coa desaturaseDM483_16145Not AvailableNegative3410423 - 341160745264.1

Displaying genes 3201 – 3210 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.