Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. SMT-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 30 |
| Temperature range | Not Available |
| Habitat | landfill |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169349 bp
Thymine Count
1177048 bp
Guanine Count
1888283 bp
Cytosine Count
1873557 bp
Genome Length
6108237 bp
Protein-coding Genes
5380 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DM483_13850 | Not Available | Positive | 2908231 - 2909121 | 33151.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | DM483_13855 | Not Available | Positive | 2909133 - 2910404 | 46589.1 |
| type i secretion system permease/atpase | DM483_13860 | Not Available | Positive | 2910643 - 2912787 | 78244.5 |
| hlyd family type i secretion periplasmic adaptor subunit | DM483_13865 | Not Available | Positive | 2912784 - 2914202 | 52187.8 |
| hypothetical protein | DM483_13870 | Not Available | Positive | 2914446 - 2915252 | 30665.5 |
| peptidase s8 | DM483_13875 | Not Available | Positive | 2915744 - 2920666 | 169368.0 |
| channel protein tolc | DM483_13880 | Not Available | Negative | 2920797 - 2922230 | 52640.3 |
| phosphomethylpyrimidine synthase | DM483_13885 | Not Available | Positive | 2922652 - 2924532 | 69731.0 |
| diguanylate cyclase | DM483_13890 | Not Available | Negative | 2924544 - 2924678 | 4245.28 |
| putative hydroxymethylpyrimidine transporter cytx | DM483_13895 | Not Available | Positive | 2924677 - 2925960 | 44953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
