Pseudomonas sp. SMT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SMT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SMT-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature30
Temperature rangeNot Available
Habitatlandfill
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SMT-1 contig68, whole genome shotgun sequence.

Gene Summary

Adenine Count

1169349 bp

Thymine Count

1177048 bp

Guanine Count

1888283 bp

Cytosine Count

1873557 bp

Genome Length

6108237 bp

Protein-coding Genes

5380 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arylsulfataseDM483_12300Not AvailableNegative2566499 - 256816361074.6
alginate export family proteinDM483_12305Not AvailablePositive2568425 - 256981651722.6
3-(3-hydroxy-phenyl)propionate transporter mhptDM483_12310Not AvailablePositive2569851 - 257109241921.3
ggdef domain-containing proteinDM483_12315Not AvailableNegative2571108 - 257216638627.9
nickel import atp-binding protein nikeDM483_12320Not AvailableNegative2572561 - 257338229976.4
nickel import atp-binding protein nikdDM483_12325Not AvailableNegative2573379 - 257414927451.8
nickel abc transporter permease subunit nikcDM483_12330Not AvailableNegative2574150 - 257499530692.7
nickel abc transporter permease subunit nikbDM483_12335Not AvailableNegative2574992 - 257593334573.3
nickel abc transporter, nickel/metallophore periplasmic binding proteinDM483_12340Not AvailableNegative2575935 - 257750957472.7
nickel-responsive transcriptional regulator nikrDM483_12345Not AvailablePositive2577597 - 257801315462.5

Displaying genes 2461 – 2470 of 5633 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.